Single-Cell RNA-seq Quality Control Automated QC workflow for single-cell RNA-seq data following scverse best practices. When to Use This Skill Use when users: - Request quality control or QC on single-cell RNA-seq data - Want to filter low-quality cells or assess data quality - Need QC visualizations or metrics - Ask to follow scverse/scanpy best practices - Request MAD-based filtering or outlier detection Supported input formats: - files (AnnData format from scanpy/Python workflows) - files (10X Genomics Cell Ranger output) Default recommendation : Use Approach 1 (complete pipeline) unless…